Publications

756 results for Life Sciences

AutoPeptideML 2: An open source library for democratizing machine learning for peptide bioactivity prediction
- - Raúl Fernández Díaz
  - Lam Thanh Hoang
  - et al.
- 2025
- ISMB 2025
Designing a Multi-Agent AI Framework to Mine Scientific Literature and Experiment Datasets to Support and Enrich Single-Cell Analyses
- - Joao Bettencourt-Silva
  - Natasha Mulligan
  - et al.
- 2025
- ISMB 2025
Learn more about our Life Sciences work
Transcriptomic Foundation Model Evaluation: Quantifying Expression Level Discrimination Through Null Sample Testing
- - Noa Moriel
  - Michael Morris Danziger
  - et al.
- 2025
- ISMB 2025
DOES YOUR MODEL UNDERSTAND GENES? A MODALITY-AGNOSTIC BENCHMARK OF GENE PROPERTIES
- - Yoav Kan-Tor
  - Michael Morris Danziger
  - et al.
- 2025
- ISMB 2025
BioVERSE: A Modular Framework for Integrating Biomedical Modalities with Language Models in Precision Medicine
- - Ching-Huei Tsou
  - Michal Ozery-Flato
  - et al.
- 2025
- ISMB 2025
Improving Transcriptomic Foundation Models Through Gene-Level Error Analysis and Adaptive Masking
- - Michael Morris Danziger
  - Bharath Dandala
  - et al.
- 2025
- ISMB 2025
Aligning Protein Conformation Ensemble Generation with Physical Feedback
- - Jiarui Lu
  - Xiaoyin Chen
  - et al.
- 2025
- ICML 2025
Learning interpretable positional encodings in transformers depends on initialization
- - Taku Ito
  - Luca Cocchi
  - et al.
- 2025
- ICML 2025
Aligning foundation models on encoded synthetic omic data for patient stratification
- - Nikita Janakarajan
  - Antonio Foncubierta
  - et al.
- 2025
- ICDH 2025
Beyond the Clinic: Leveraging Speech Acoustics and Phonetics for Cognitive Monitoring in PKU
- - Kely Norel
  - Carla Agurto Rios
  - et al.
- 2025
- ICDH 2025